Genetic signatures of a range expansion in natura: when clones play leapfrog.
Identifieur interne : 000033 ( Main/Exploration ); précédent : 000032; suivant : 000034Genetic signatures of a range expansion in natura: when clones play leapfrog.
Auteurs : Ronan Becheler ; Constance Xhaard ; Etienne K. Klein ; Katherine J. Hayden ; Pascal Frey ; Stéphane De Mita ; Fabien HalkettSource :
- Ecology and evolution [ 2045-7758 ] ; 2016.
Abstract
The genetic consequences of range expansions have generally been investigated at wide geographical and temporal scales, long after the colonization event. A unique ecological system enabled us to both monitor the colonization dynamics and decipher the genetic footprints of expansion over a very short time period. Each year an epidemic of the poplar rust (Melampsora larici-populina) expands clonally and linearly along the Durance River, in the Alps. The colonization dynamics observed in 2004 showed two phases with different genetic outcomes. Upstream, fast colonization maintained high genetic diversity. Downstream, the colonization wave progressively faltered, diversity eroded, and differentiation increased, as expected under recurrent founder events. In line with the high dispersal abilities of rust pathogens, we provide evidence for leapfrog dispersal of clones. Our results thus emphasize the importance of colonization dynamics in shaping spatial genetic structure in the face of high gene flow.
DOI: 10.1002/ece3.2392
PubMed: 27777735
PubMed Central: PMC5058533
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genetic signatures of a range expansion in natura: when clones play leapfrog.</title><author><name sortKey="Becheler, Ronan" sort="Becheler, Ronan" uniqKey="Becheler R" first="Ronan" last="Becheler">Ronan Becheler</name><affiliation><nlm:affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</nlm:affiliation><wicri:noCountry code="no comma">UMR IAM INRA Université de Lorraine 54000 Nancy France.</wicri:noCountry></affiliation></author><author><name sortKey="Xhaard, Constance" sort="Xhaard, Constance" uniqKey="Xhaard C" first="Constance" last="Xhaard">Constance Xhaard</name><affiliation><nlm:affiliation>UMR IAMINRA Université de Lorraine54000 Nancy France; Present address: INSERM U1018, CESP, Univ. Paris-Sud UVSQ, Université Paris-Saclay Institut Gustave Roussy Villejuif France.</nlm:affiliation><wicri:noCountry code="subField">Université Paris-Saclay Institut Gustave Roussy Villejuif France</wicri:noCountry></affiliation></author><author><name sortKey="Klein, Etienne K" sort="Klein, Etienne K" uniqKey="Klein E" first="Etienne K" last="Klein">Etienne K. Klein</name><affiliation><nlm:affiliation>UR Biostatistique et Processus Spatiaux INRA 84914 Avignon France.</nlm:affiliation><wicri:noCountry code="no comma">UR Biostatistique et Processus Spatiaux INRA 84914 Avignon France.</wicri:noCountry></affiliation></author><author><name sortKey="Hayden, Katherine J" sort="Hayden, Katherine J" uniqKey="Hayden K" first="Katherine J" last="Hayden">Katherine J. Hayden</name><affiliation><nlm:affiliation>UMR IAMINRA Université de Lorraine 54000 Nancy France; Present address: Royal Botanic Garden Edinburgh 20a Inverleith Row Edinburgh EH3 5LR UK.</nlm:affiliation><wicri:noCountry code="no comma">UMR IAMINRA Université de Lorraine 54000 Nancy France; Present address: Royal Botanic Garden Edinburgh 20a Inverleith Row Edinburgh EH3 5LR UK.</wicri:noCountry></affiliation></author><author><name sortKey="Frey, Pascal" sort="Frey, Pascal" uniqKey="Frey P" first="Pascal" last="Frey">Pascal Frey</name><affiliation><nlm:affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</nlm:affiliation><wicri:noCountry code="no comma">UMR IAM INRA Université de Lorraine 54000 Nancy France.</wicri:noCountry></affiliation></author><author><name sortKey="De Mita, Stephane" sort="De Mita, Stephane" uniqKey="De Mita S" first="Stéphane" last="De Mita">Stéphane De Mita</name><affiliation><nlm:affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</nlm:affiliation><wicri:noCountry code="no comma">UMR IAM INRA Université de Lorraine 54000 Nancy France.</wicri:noCountry></affiliation></author><author><name sortKey="Halkett, Fabien" sort="Halkett, Fabien" uniqKey="Halkett F" first="Fabien" last="Halkett">Fabien Halkett</name><affiliation><nlm:affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</nlm:affiliation><wicri:noCountry code="no comma">UMR IAM INRA Université de Lorraine 54000 Nancy France.</wicri:noCountry></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2016">2016</date><idno type="RBID">pubmed:27777735</idno><idno type="pmid">27777735</idno><idno type="doi">10.1002/ece3.2392</idno><idno type="pmc">PMC5058533</idno><idno type="wicri:Area/Main/Corpus">000028</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000028</idno><idno type="wicri:Area/Main/Curation">000028</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000028</idno><idno type="wicri:Area/Main/Exploration">000028</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Genetic signatures of a range expansion in natura: when clones play leapfrog.</title><author><name sortKey="Becheler, Ronan" sort="Becheler, Ronan" uniqKey="Becheler R" first="Ronan" last="Becheler">Ronan Becheler</name><affiliation><nlm:affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</nlm:affiliation><wicri:noCountry code="no comma">UMR IAM INRA Université de Lorraine 54000 Nancy France.</wicri:noCountry></affiliation></author><author><name sortKey="Xhaard, Constance" sort="Xhaard, Constance" uniqKey="Xhaard C" first="Constance" last="Xhaard">Constance Xhaard</name><affiliation><nlm:affiliation>UMR IAMINRA Université de Lorraine54000 Nancy France; Present address: INSERM U1018, CESP, Univ. Paris-Sud UVSQ, Université Paris-Saclay Institut Gustave Roussy Villejuif France.</nlm:affiliation><wicri:noCountry code="subField">Université Paris-Saclay Institut Gustave Roussy Villejuif France</wicri:noCountry></affiliation></author><author><name sortKey="Klein, Etienne K" sort="Klein, Etienne K" uniqKey="Klein E" first="Etienne K" last="Klein">Etienne K. Klein</name><affiliation><nlm:affiliation>UR Biostatistique et Processus Spatiaux INRA 84914 Avignon France.</nlm:affiliation><wicri:noCountry code="no comma">UR Biostatistique et Processus Spatiaux INRA 84914 Avignon France.</wicri:noCountry></affiliation></author><author><name sortKey="Hayden, Katherine J" sort="Hayden, Katherine J" uniqKey="Hayden K" first="Katherine J" last="Hayden">Katherine J. Hayden</name><affiliation><nlm:affiliation>UMR IAMINRA Université de Lorraine 54000 Nancy France; Present address: Royal Botanic Garden Edinburgh 20a Inverleith Row Edinburgh EH3 5LR UK.</nlm:affiliation><wicri:noCountry code="no comma">UMR IAMINRA Université de Lorraine 54000 Nancy France; Present address: Royal Botanic Garden Edinburgh 20a Inverleith Row Edinburgh EH3 5LR UK.</wicri:noCountry></affiliation></author><author><name sortKey="Frey, Pascal" sort="Frey, Pascal" uniqKey="Frey P" first="Pascal" last="Frey">Pascal Frey</name><affiliation><nlm:affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</nlm:affiliation><wicri:noCountry code="no comma">UMR IAM INRA Université de Lorraine 54000 Nancy France.</wicri:noCountry></affiliation></author><author><name sortKey="De Mita, Stephane" sort="De Mita, Stephane" uniqKey="De Mita S" first="Stéphane" last="De Mita">Stéphane De Mita</name><affiliation><nlm:affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</nlm:affiliation><wicri:noCountry code="no comma">UMR IAM INRA Université de Lorraine 54000 Nancy France.</wicri:noCountry></affiliation></author><author><name sortKey="Halkett, Fabien" sort="Halkett, Fabien" uniqKey="Halkett F" first="Fabien" last="Halkett">Fabien Halkett</name><affiliation><nlm:affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</nlm:affiliation><wicri:noCountry code="no comma">UMR IAM INRA Université de Lorraine 54000 Nancy France.</wicri:noCountry></affiliation></author></analytic><series><title level="j">Ecology and evolution</title><idno type="ISSN">2045-7758</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The genetic consequences of range expansions have generally been investigated at wide geographical and temporal scales, long after the colonization event. A unique ecological system enabled us to both monitor the colonization dynamics and decipher the genetic footprints of expansion over a very short time period. Each year an epidemic of the poplar rust (<i>Melampsora larici-populina</i>) expands clonally and linearly along the Durance River, in the Alps. The colonization dynamics observed in 2004 showed two phases with different genetic outcomes. Upstream, fast colonization maintained high genetic diversity. Downstream, the colonization wave progressively faltered, diversity eroded, and differentiation increased, as expected under recurrent founder events. In line with the high dispersal abilities of rust pathogens, we provide evidence for leapfrog dispersal of clones. Our results thus emphasize the importance of colonization dynamics in shaping spatial genetic structure in the face of high gene flow.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">27777735</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">2045-7758</ISSN><JournalIssue CitedMedium="Print"><Volume>6</Volume><Issue>18</Issue><PubDate><Year>2016</Year><Month>09</Month></PubDate></JournalIssue><Title>Ecology and evolution</Title><ISOAbbreviation>Ecol Evol</ISOAbbreviation></Journal><ArticleTitle>Genetic signatures of a range expansion in natura: when clones play leapfrog.</ArticleTitle><Pagination><MedlinePgn>6625-6632</MedlinePgn></Pagination><Abstract><AbstractText>The genetic consequences of range expansions have generally been investigated at wide geographical and temporal scales, long after the colonization event. A unique ecological system enabled us to both monitor the colonization dynamics and decipher the genetic footprints of expansion over a very short time period. Each year an epidemic of the poplar rust (<i>Melampsora larici-populina</i>) expands clonally and linearly along the Durance River, in the Alps. The colonization dynamics observed in 2004 showed two phases with different genetic outcomes. Upstream, fast colonization maintained high genetic diversity. Downstream, the colonization wave progressively faltered, diversity eroded, and differentiation increased, as expected under recurrent founder events. In line with the high dispersal abilities of rust pathogens, we provide evidence for leapfrog dispersal of clones. Our results thus emphasize the importance of colonization dynamics in shaping spatial genetic structure in the face of high gene flow.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Becheler</LastName><ForeName>Ronan</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xhaard</LastName><ForeName>Constance</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>UMR IAMINRA Université de Lorraine54000 Nancy France; Present address: INSERM U1018, CESP, Univ. Paris-Sud UVSQ, Université Paris-Saclay Institut Gustave Roussy Villejuif France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Klein</LastName><ForeName>Etienne K</ForeName><Initials>EK</Initials><AffiliationInfo><Affiliation>UR Biostatistique et Processus Spatiaux INRA 84914 Avignon France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hayden</LastName><ForeName>Katherine J</ForeName><Initials>KJ</Initials><AffiliationInfo><Affiliation>UMR IAMINRA Université de Lorraine 54000 Nancy France; Present address: Royal Botanic Garden Edinburgh 20a Inverleith Row Edinburgh EH3 5LR UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Frey</LastName><ForeName>Pascal</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>De Mita</LastName><ForeName>Stéphane</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Halkett</LastName><ForeName>Fabien</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>UMR IAM INRA Université de Lorraine 54000 Nancy France.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>08</Month><Day>26</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Ecol Evol</MedlineTA><NlmUniqueID>101566408</NlmUniqueID><ISSNLinking>2045-7758</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">Biological invasions</Keyword><Keyword MajorTopicYN="Y">colonization</Keyword><Keyword MajorTopicYN="Y">dispersal</Keyword><Keyword MajorTopicYN="Y">fungal plant pathogen</Keyword><Keyword MajorTopicYN="Y">genetic diversity</Keyword><Keyword MajorTopicYN="Y">range expansion</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>08</Month><Day>01</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2016</Year><Month>08</Month><Day>02</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2016</Year><Month>10</Month><Day>26</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2016</Year><Month>10</Month><Day>26</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2016</Year><Month>10</Month><Day>26</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">27777735</ArticleId><ArticleId IdType="doi">10.1002/ece3.2392</ArticleId><ArticleId IdType="pii">ECE32392</ArticleId><ArticleId IdType="pmc">PMC5058533</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Mol Ecol. 2000 Nov;9(11):1905-9</Citation><ArticleIdList><ArticleId IdType="pubmed">11091326</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2002 Jul 26;297(5581):537-41</Citation><ArticleIdList><ArticleId IdType="pubmed">12142520</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2004 Jan 27;101(4):975-9</Citation><ArticleIdList><ArticleId IdType="pubmed">14732681</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2006 Mar;23(3):482-90</Citation><ArticleIdList><ArticleId IdType="pubmed">16280540</ArticleId></ArticleIdList></Reference><Reference><Citation>J Evol Biol. 2006 Jan;19(1):12-20</Citation><ArticleIdList><ArticleId IdType="pubmed">16405572</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Ecol Evol. 2005 Apr;20(4):194-201</Citation><ArticleIdList><ArticleId IdType="pubmed">16701368</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 1983 Nov;105(3):767-79</Citation><ArticleIdList><ArticleId IdType="pubmed">17246175</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 1978 Jul;89(3):583-90</Citation><ArticleIdList><ArticleId IdType="pubmed">17248844</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2007 May 8;104(19):7993-8</Citation><ArticleIdList><ArticleId IdType="pubmed">17470818</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2007 Oct;24(10):2334-43</Citation><ArticleIdList><ArticleId IdType="pubmed">17703053</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2007 Dec;16(24):5115-39</Citation><ArticleIdList><ArticleId IdType="pubmed">17944846</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2007 Dec 11;104(50):19926-30</Citation><ArticleIdList><ArticleId IdType="pubmed">18056799</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Ecol Evol. 2008 Jul;23(7):347-51</Citation><ArticleIdList><ArticleId IdType="pubmed">18502536</ArticleId></ArticleIdList></Reference><Reference><Citation>J Evol Biol. 2009 Nov;22(11):2171-82</Citation><ArticleIdList><ArticleId IdType="pubmed">20069723</ArticleId></ArticleIdList></Reference><Reference><Citation>Heredity (Edinb). 2011 Feb;106(2):203-4</Citation><ArticleIdList><ArticleId IdType="pubmed">20502481</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2010 Nov;19(21):4812-22</Citation><ArticleIdList><ArticleId IdType="pubmed">20958817</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2011 Jul;20(13):2739-55</Citation><ArticleIdList><ArticleId IdType="pubmed">21627704</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 2012 May;191(1):171-81</Citation><ArticleIdList><ArticleId IdType="pubmed">22367031</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2012 May;21(10):2383-98</Citation><ArticleIdList><ArticleId IdType="pubmed">22490255</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2012 Oct;21(20):4996-5008</Citation><ArticleIdList><ArticleId IdType="pubmed">22967194</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2013 May;22(10):2771-86</Citation><ArticleIdList><ArticleId IdType="pubmed">23506060</ArticleId></ArticleIdList></Reference><Reference><Citation>Evolution. 2013 May;67(5):1307-20</Citation><ArticleIdList><ArticleId IdType="pubmed">23617910</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2013 Dec;22(23):5793-804</Citation><ArticleIdList><ArticleId IdType="pubmed">24192018</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol Resour. 2015 Jan;15(1):117-22</Citation><ArticleIdList><ArticleId IdType="pubmed">24902875</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2014 Nov 18;111(46):E4911-9</Citation><ArticleIdList><ArticleId IdType="pubmed">25368183</ArticleId></ArticleIdList></Reference><Reference><Citation>Evolution. 1984 Nov;38(6):1358-1370</Citation><ArticleIdList><ArticleId IdType="pubmed">28563791</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list></list><tree><noCountry><name sortKey="Becheler, Ronan" sort="Becheler, Ronan" uniqKey="Becheler R" first="Ronan" last="Becheler">Ronan Becheler</name><name sortKey="De Mita, Stephane" sort="De Mita, Stephane" uniqKey="De Mita S" first="Stéphane" last="De Mita">Stéphane De Mita</name><name sortKey="Frey, Pascal" sort="Frey, Pascal" uniqKey="Frey P" first="Pascal" last="Frey">Pascal Frey</name><name sortKey="Halkett, Fabien" sort="Halkett, Fabien" uniqKey="Halkett F" first="Fabien" last="Halkett">Fabien Halkett</name><name sortKey="Hayden, Katherine J" sort="Hayden, Katherine J" uniqKey="Hayden K" first="Katherine J" last="Hayden">Katherine J. Hayden</name><name sortKey="Klein, Etienne K" sort="Klein, Etienne K" uniqKey="Klein E" first="Etienne K" last="Klein">Etienne K. Klein</name><name sortKey="Xhaard, Constance" sort="Xhaard, Constance" uniqKey="Xhaard C" first="Constance" last="Xhaard">Constance Xhaard</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarRustV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000033 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000033 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PoplarRustV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:27777735
|texte= Genetic signatures of a range expansion in natura: when clones play leapfrog.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:27777735" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PoplarRustV1
| This area was generated with Dilib version V0.6.37. |  |